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ID | Project Accession | Organism | Study Title | Center Name | Cancer Type | Amplification Method |
---|---|---|---|---|---|---|
1 | SRP002535 | Homo sapiens | Single Cell Tumor Progression | COLD SPRING HARBOR LABORATORY | Breast cancer and liver cancer | DOP-PCR |
2 | SRP030642 | Homo sapiens | Single Neuron and Fibroblast Sequencing | University of Virginia | notcancer-neuron and fibroblast | DOP-PCR,MDA |
3 | SRP064210 | Homo sapiens | Single cell sequencing identifies clonal stasis and punctuated copy number evolution in triple negative breast cancer patients | The UT MD Anderson Cancer Center | Breast cancer | DOP-PCR |
4 | SRP052908 | Homo sapiens | eWGA-Seq for single cell whole genome sequencing | Peking University | Colorectal cancer and HUVEC | eMDA,MDA,MALBAC,DOP-PCR |
5 | SRP051114 | Homo sapiens | Homo sapiens Genome sequencing | Boston Childrens Hospital | notcancer-neuron and lymphoblast | DOP-PCR,MDA |
6 | SRP016866 | Homo sapiens | Single cells Genome Sequencing-1 | BGI-Shenzhen | notcancer-blood or embryos | DOP-PCR |
7 | SRP008292 | Homo sapiens | St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project(PCGP): Whole Genome Sequencing of Childhood Medulloblastoma | ST. JUDE CHILDREN'S RESEARCH HOSPITAL | Medulloblastoma | DOP-PCR |
8 | SRP050588 | Homo sapiens | Comparison of Whole Genome Amplification Methods used in Single-cell Sequencing | BGI | Gastric cancer and lymphoblastoid | MDA,MALBAC,DOP-PCR |
9 | SRP055057 | Homo sapiens | C_DOP_L method for single cell sequencing | Memorial Sloan Kettering Cancer Center | Breast cancer | DOP-PCR |
10 | SRP041670 | Homo sapiens | Mus musculus and Homo sapiens Single Cell Sequencing | Massachusetts Institute of Technology | notcancer-fibroblast neuron and liver | DOP-PCR |
11 | SRP102259 | Homo sapiens | Single-Cell Whole Genome Analyses by Linear Amplification via Transposon Insertion (LIANTI) | Harvard University | notcancer-fibroblast | LIANTI,MDA,MALBAC,DOP-PCR |
12 | SRP215441 | Homo sapiens | breast cancer single-cell whole genome sequencing | Philips Research North America | Breast cancer | DOP-PCR |
13 | SRP222840 | Homo sapiens | Homo sapiens | Cold Spring Harbor Laboratory | Breast cancer and fibroblast | DOP-PCR |
14 | SRP081010 | Homo sapiens | Human, Mouse, Rhesus Raw sequence reads | Oregon Health & Science University | notcancer-lymphoblastoid | DOP-PCR |
15 | SRP224945 | Homo sapiens | Single-cell DNA replication sequencing (scRepli-seq): a method for mapping replication timing domains genome wide in single mammalian cells | Graduate School of Medicine, Mie University | notcancer-epithelial cells | DOP-PCR |
16 | SRP116771 | Homo sapiens | Synchronous ductal carcinoma in situ single cell DNA sequencing | MD Anderson | Breast cancer | DOP-PCR |
17 | SRP398595 | Homo sapiens | cbNIPT sequencing data | Zhejiang University | notcancer-blood or saliva or amnioticfluid | DOP-PCR |
18 | ERP024468 | Homo sapiens | Comparison of seven single cell Whole Genome Amplification commercial kits using targeted sequencing | European Bioinformatics Institute;Department of Computer Science and Applied Mathematics;Weizmann Institute of Science | notcancer-embryonic stem and epithelial | LA-PCR,MALBAC,DOP-PCR,MDA |
19 | ERP137498 | Homo sapiens | Whole Genome Amplification surveying yield, reproducibility and heterozygous balance, reported by MIPs targeting STRs | European Bioinformatics Institute;WIS | notcancer-embryonic stem | MALBAC,DOP-PCR,MDA |
20 | SRP114962 | Homo sapiens | Adaptive and Acquired Evolution in Response to Chemotherapy in Triple-Negative Breast Cancer | The UT MD Anderson Cancer Center | Breast cancer | DOP-PCR |
21 | EGAS00001002102 | Homo sapiens | DOP-PCR |
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