SRP017186

See detailed project information

   Project:  SRP017186
   Organism:  Homo sapiens
   Study Title:  Human Sperm Genome Sequencing
   Center Name:  Harvard University
   Description:  We amplified 99 individual sperms by MALBAC then and sequenced by Hiseq. The bulk DNA of the donor and his parents are also sequenced, in order to ficiliate the analysis of sperm recombination events.
   Cell Type:  notcancer-germ-sperm
   Median Sequencing Depth:  1.550872
   Publication:  Probing Meiotic Recombination and Aneuploidy of Single Sperm Cells by Whole-Genome Sequencing
   DOI:  10.1126/science.1229112

See including samples and runs (Click accession number in the table to see sample/run information)

   Number of samples:  122
   Number of runs:  122
   Number of single cell runs:  111
   
IDProject AccessionSample AccessionRun AccessionRaw DepthGenerated FASTQ Files
(Copy ftp address to download)		SRA Files
(Copy ftp address to download)
1SRP017186SAMN01801835SRR6185658.1706470480ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618565/SRR618565_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618565/SRR618565_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618565
2SRP017186SAMN01801836SRR6185668.1359993910ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618566/SRR618566_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618566/SRR618566_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618566
3SRP017186SAMN01801837SRR6185677.3001510040ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618567/SRR618567_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618567/SRR618567_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618567
4SRP017186SAMN01801838SRR6185687.2905396230ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618568/SRR618568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618568/SRR618568_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618568
5SRP017186SAMN01801839SRR6185697.2929502740ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618569/SRR618569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618569/SRR618569_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618569
6SRP017186SAMN01801840SRR6185706.6014171030ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618570/SRR618570_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618570/SRR618570_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618570
7SRP017186SAMN01801841SRR6185712.4235825620ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618571/SRR618571.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618571
8SRP017186SAMN01801842SRR6185722.1522580340ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618572/SRR618572.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618572
9SRP017186SAMN01801843SRR6185732.0325810410ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618573/SRR618573.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618573
10SRP017186SAMN01801844SRR6185742.0227934270ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618574/SRR618574_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618574/SRR618574_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618574
11SRP017186SAMN01801845SRR6185751.8162838100ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618575/SRR618575_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618575/SRR618575_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618575
12SRP017186SAMN01801846SRR6185761.7809664640ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618576/SRR618576_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618576/SRR618576_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618576
13SRP017186SAMN01801847SRR6185771.9440699330ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618577/SRR618577_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618577/SRR618577_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618577
14SRP017186SAMN01801848SRR6185781.9370376750ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618578/SRR618578_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618578/SRR618578_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618578
15SRP017186SAMN01801849SRR6185791.8091312230ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618579/SRR618579_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618579/SRR618579_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618579
16SRP017186SAMN01801850SRR6185801.7066498480ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618580/SRR618580_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618580/SRR618580_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618580
17SRP017186SAMN01801851SRR6185811.7379547780ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618581/SRR618581_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618581/SRR618581_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618581
18SRP017186SAMN01801852SRR6185821.7534488130ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618582/SRR618582_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618582/SRR618582_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618582
19SRP017186SAMN01801853SRR6185831.9611006090ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618583/SRR618583_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618583/SRR618583_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618583
20SRP017186SAMN01801854SRR6185841.9909690200ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618584/SRR618584_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618584/SRR618584_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618584
21SRP017186SAMN01801855SRR6185851.9372342060ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618585/SRR618585_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618585/SRR618585_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618585
22SRP017186SAMN01801856SRR6185862.0261914180ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618586/SRR618586_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618586/SRR618586_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618586
23SRP017186SAMN01801857SRR6185871.8869107730ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618587/SRR618587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618587/SRR618587_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618587
24SRP017186SAMN01801858SRR6185881.7424115640ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618588/SRR618588_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618588/SRR618588_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618588
25SRP017186SAMN01801859SRR6185891.7464299450ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618589/SRR618589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618589/SRR618589_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618589
26SRP017186SAMN01801860SRR6185901.5524996350ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618590/SRR618590_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618590/SRR618590_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618590
27SRP017186SAMN01801861SRR6185911.8440774800ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618591/SRR618591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618591/SRR618591_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618591
28SRP017186SAMN01801862SRR6185921.7621043210ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618592/SRR618592_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618592/SRR618592_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618592
29SRP017186SAMN01801863SRR6185931.7681037130ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618593/SRR618593_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618593/SRR618593_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618593
30SRP017186SAMN01801864SRR6185941.5492437010ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618594/SRR618594_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618594/SRR618594_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618594
31SRP017186SAMN01801865SRR6185951.6922634810ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618595/SRR618595_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618595/SRR618595_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618595
32SRP017186SAMN01801866SRR6185961.2796001830ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618596/SRR618596_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618596/SRR618596_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618596
33SRP017186SAMN01801867SRR6185971.5209292760ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618597/SRR618597_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618597/SRR618597_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618597
34SRP017186SAMN01801868SRR6185981.3710701160ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618598/SRR618598_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618598/SRR618598_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618598
35SRP017186SAMN01801869SRR6185991.2983533170ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618599/SRR618599_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618599/SRR618599_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618599
36SRP017186SAMN01801870SRR6186001.3783200850ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618600/SRR618600_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618600/SRR618600_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618600
37SRP017186SAMN01801871SRR6186011.3584411440ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618601/SRR618601_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618601/SRR618601_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618601
38SRP017186SAMN01801872SRR6186021.7708751670ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618602/SRR618602_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618602/SRR618602_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618602
39SRP017186SAMN01801873SRR6186031.4728769930ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618603/SRR618603_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618603/SRR618603_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618603
40SRP017186SAMN01801874SRR6186041.7113191110ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618604/SRR618604_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618604/SRR618604_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618604
41SRP017186SAMN01801875SRR6186051.5637607430ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618605/SRR618605_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618605/SRR618605_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618605
42SRP017186SAMN01801876SRR6186061.3640437010ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618606/SRR618606_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618606/SRR618606_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618606
43SRP017186SAMN01801877SRR6186071.1710636640ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618607/SRR618607_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618607/SRR618607_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618607
44SRP017186SAMN01801878SRR6186081.6560230070ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618608/SRR618608_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618608/SRR618608_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618608
45SRP017186SAMN01801879SRR6186091.0173804020ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618609/SRR618609_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618609/SRR618609_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618609
46SRP017186SAMN01801880SRR6186101.4386800970ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618610/SRR618610_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618610/SRR618610_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618610
47SRP017186SAMN01801881SRR6186111.4179962870ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618611/SRR618611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618611/SRR618611_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618611
48SRP017186SAMN01801882SRR6186121.3969090690ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618612/SRR618612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618612/SRR618612_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618612
49SRP017186SAMN01801883SRR6186131.0736086430ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618613/SRR618613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618613/SRR618613_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618613
50SRP017186SAMN01801884SRR6186140.9040895920ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618614/SRR618614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618614/SRR618614_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618614
51SRP017186SAMN01801885SRR6186151.1512642120ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618615/SRR618615_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618615/SRR618615_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618615
52SRP017186SAMN01801886SRR6186161.0947064520ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618616/SRR618616_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618616/SRR618616_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618616
53SRP017186SAMN01801887SRR6186171.1013557520ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618617/SRR618617_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618617/SRR618617_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618617
54SRP017186SAMN01801888SRR6186180.9728603160ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618618/SRR618618_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618618/SRR618618_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618618
55SRP017186SAMN01801889SRR6186191.1586877660ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618619/SRR618619_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618619/SRR618619_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618619
56SRP017186SAMN01801890SRR6186201.3529175900ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618620/SRR618620_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618620/SRR618620_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618620
57SRP017186SAMN01801891SRR6186211.2444742540ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618621/SRR618621_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618621/SRR618621_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618621
58SRP017186SAMN01801892SRR6186220.9994506390ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618622/SRR618622_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618622/SRR618622_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618622
59SRP017186SAMN01801893SRR6186231.2125561170ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618623/SRR618623_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618623/SRR618623_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618623
60SRP017186SAMN01801894SRR6186241.4095152770ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618624/SRR618624_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR618/SRR618624/SRR618624_2.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR618/SRR618624
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