SRP106579

See detailed project information

   Project:  SRP106579
   Organism:  Homo sapiens
   Study Title:  Single-stranded Sequencing using microfluidic reactors (SISSOR)
   Center Name:  Univ. of California San Diego
   Description:  The purpose of this project is to design, optimize and validate a microfluidic processor that allow for ultra-accurate genome sequencing of single human cells with the error rate lower than one in 100 millions bases
   Cell Type:  notcancer-skin fibroblast
   Median Sequencing Depth:  1.807956
   Publication:  Ultraaccurate genome sequencing and haplotyping of single human cells
   DOI:  10.1073/pnas.1707609114

See including samples and runs (Click accession number in the table to see sample/run information)

   Number of samples:  72
   Number of runs:  72
   Number of single cell runs:  72
   
IDProject AccessionSample AccessionRun AccessionRaw DepthGenerated FASTQ Files
(Copy ftp address to download)		SRA Files
(Copy ftp address to download)
1SRP106579SAMN06909034SRR55147001.1468222250ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514700/SRR5514700.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514700
2SRP106579SAMN06909035SRR55147011.7573499640ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514701/SRR5514701.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514701
3SRP106579SAMN06909044SRR55147021.4634194160ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/002/SRR5514702/SRR5514702.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/002/SRR5514702
4SRP106579SAMN06909045SRR55147033.2559145770ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/003/SRR5514703/SRR5514703.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/003/SRR5514703
5SRP106579SAMN06909046SRR55147041.2178381620ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/004/SRR5514704/SRR5514704.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/004/SRR5514704
6SRP106579SAMN06909047SRR55147053.0589800930ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/005/SRR5514705/SRR5514705.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/005/SRR5514705
7SRP106579SAMN06909048SRR55147062.2045699230ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/006/SRR5514706/SRR5514706.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/006/SRR5514706
8SRP106579SAMN06909049SRR55147072.2459536650ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/007/SRR5514707/SRR5514707.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/007/SRR5514707
9SRP106579SAMN06909050SRR55147082.3298694660ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/008/SRR5514708/SRR5514708.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/008/SRR5514708
10SRP106579SAMN06909051SRR55147092.1963165790ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/009/SRR5514709/SRR5514709.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/009/SRR5514709
11SRP106579SAMN06909052SRR55147101.1496274480ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514710/SRR5514710.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514710
12SRP106579SAMN06909053SRR55147112.8283554220ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514711/SRR5514711.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514711
13SRP106579SAMN06909036SRR55147121.4371514670ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/002/SRR5514712/SRR5514712.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/002/SRR5514712
14SRP106579SAMN06909054SRR55147132.5330373220ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/003/SRR5514713/SRR5514713.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/003/SRR5514713
15SRP106579SAMN06909055SRR55147143.5280190990ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/004/SRR5514714/SRR5514714.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/004/SRR5514714
16SRP106579SAMN06909056SRR55147151.2092349300ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/005/SRR5514715/SRR5514715.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/005/SRR5514715
17SRP106579SAMN06909057SRR55147163.1063114100ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/006/SRR5514716/SRR5514716.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/006/SRR5514716
18SRP106579SAMN06909058SRR55147172.3652663720ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/007/SRR5514717/SRR5514717.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/007/SRR5514717
19SRP106579SAMN06909059SRR55147181.8175741050ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/008/SRR5514718/SRR5514718.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/008/SRR5514718
20SRP106579SAMN06909060SRR55147192.1230904570ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/009/SRR5514719/SRR5514719.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/009/SRR5514719
21SRP106579SAMN06909061SRR55147205.5486185710ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514720/SRR5514720.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514720
22SRP106579SAMN06909062SRR55147214.3139591460ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514721/SRR5514721.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514721
23SRP106579SAMN06909063SRR55147225.0115031400ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/002/SRR5514722/SRR5514722.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/002/SRR5514722
24SRP106579SAMN06909037SRR55147232.1586319350ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/003/SRR5514723/SRR5514723.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/003/SRR5514723
25SRP106579SAMN06909064SRR55147244.8138825120ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/004/SRR5514724/SRR5514724.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/004/SRR5514724
26SRP106579SAMN06909065SRR55147252.0567893240ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/005/SRR5514725/SRR5514725.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/005/SRR5514725
27SRP106579SAMN06909066SRR55147262.1361379070ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/006/SRR5514726/SRR5514726.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/006/SRR5514726
28SRP106579SAMN06909067SRR55147271.2914089900ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/007/SRR5514727/SRR5514727.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/007/SRR5514727
29SRP106579SAMN06909068SRR55147281.6538489530ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/008/SRR5514728/SRR5514728.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/008/SRR5514728
30SRP106579SAMN06909069SRR55147293.1763771230ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/009/SRR5514729/SRR5514729.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/009/SRR5514729
31SRP106579SAMN06909070SRR55147301.4788064280ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514730/SRR5514730.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514730
32SRP106579SAMN06909071SRR55147311.2703718690ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514731/SRR5514731.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514731
33SRP106579SAMN06909072SRR55147321.4454925940ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/002/SRR5514732/SRR5514732.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/002/SRR5514732
34SRP106579SAMN06909073SRR55147331.8593310790ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/003/SRR5514733/SRR5514733.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/003/SRR5514733
35SRP106579SAMN06909038SRR55147341.8665731440ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/004/SRR5514734/SRR5514734.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/004/SRR5514734
36SRP106579SAMN06909074SRR55147353.9343624450ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/005/SRR5514735/SRR5514735.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/005/SRR5514735
37SRP106579SAMN06909075SRR55147364.3822371850ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/006/SRR5514736/SRR5514736.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/006/SRR5514736
38SRP106579SAMN06909076SRR55147371.5063809810ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/007/SRR5514737/SRR5514737.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/007/SRR5514737
39SRP106579SAMN06909077SRR55147386.7586220120ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/008/SRR5514738/SRR5514738.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/008/SRR5514738
40SRP106579SAMN06909078SRR55147391.5847339160ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/009/SRR5514739/SRR5514739.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/009/SRR5514739
41SRP106579SAMN06909079SRR55147401.1300446280ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514740/SRR5514740.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514740
42SRP106579SAMN06909080SRR55147411.0804786560ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514741/SRR5514741.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514741
43SRP106579SAMN06909081SRR55147422.3830637370ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/002/SRR5514742/SRR5514742.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/002/SRR5514742
44SRP106579SAMN06909082SRR55147430.1092991540ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/003/SRR5514743/SRR5514743.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/003/SRR5514743
45SRP106579SAMN06909083SRR55147440.4627528510ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/004/SRR5514744/SRR5514744.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/004/SRR5514744
46SRP106579SAMN06909039SRR55147453.4970568900ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/005/SRR5514745/SRR5514745.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/005/SRR5514745
47SRP106579SAMN06909084SRR55147460.0994484230ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/006/SRR5514746/SRR5514746.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/006/SRR5514746
48SRP106579SAMN06909085SRR55147470.9971153380ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/007/SRR5514747/SRR5514747.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/007/SRR5514747
49SRP106579SAMN06909086SRR55147481.6108812580ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/008/SRR5514748/SRR5514748.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/008/SRR5514748
50SRP106579SAMN06909087SRR55147491.9580505500ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/009/SRR5514749/SRR5514749.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/009/SRR5514749
51SRP106579SAMN06909088SRR55147501.7022605480ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514750/SRR5514750.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514750
52SRP106579SAMN06909089SRR55147512.0879999130ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514751/SRR5514751.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514751
53SRP106579SAMN06909090SRR55147520.1791044270ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/002/SRR5514752/SRR5514752.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/002/SRR5514752
54SRP106579SAMN06909091SRR55147532.3912167700ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/003/SRR5514753/SRR5514753.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/003/SRR5514753
55SRP106579SAMN06909092SRR55147541.7983386200ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/004/SRR5514754/SRR5514754.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/004/SRR5514754
56SRP106579SAMN06909093SRR55147552.6837613410ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/005/SRR5514755/SRR5514755.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/005/SRR5514755
57SRP106579SAMN06909040SRR55147561.7710473220ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/006/SRR5514756/SRR5514756.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/006/SRR5514756
58SRP106579SAMN06909094SRR55147571.6756974220ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/007/SRR5514757/SRR5514757.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/007/SRR5514757
59SRP106579SAMN06909095SRR55147581.8231362610ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/008/SRR5514758/SRR5514758.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/008/SRR5514758
60SRP106579SAMN06909096SRR55147591.4597840420ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/009/SRR5514759/SRR5514759.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/009/SRR5514759
61SRP106579SAMN06909097SRR55147602.3107116570ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514760/SRR5514760.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514760
62SRP106579SAMN06909098SRR55147610.6411710510ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514761/SRR5514761.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514761
63SRP106579SAMN06909099SRR55147620.6171806290ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/002/SRR5514762/SRR5514762.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/002/SRR5514762
64SRP106579SAMN06909100SRR55147630.5673143090ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/003/SRR5514763/SRR5514763.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/003/SRR5514763
65SRP106579SAMN06909101SRR55147640.4301468600ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/004/SRR5514764/SRR5514764.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/004/SRR5514764
66SRP106579SAMN06909102SRR55147650.5828273120ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/005/SRR5514765/SRR5514765.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/005/SRR5514765
67SRP106579SAMN06909103SRR55147660.3886910260ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/006/SRR5514766/SRR5514766.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/006/SRR5514766
68SRP106579SAMN06909041SRR55147671.8477665050ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/007/SRR5514767/SRR5514767.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/007/SRR5514767
69SRP106579SAMN06909104SRR55147680.3537205330ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/008/SRR5514768/SRR5514768.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/008/SRR5514768
70SRP106579SAMN06909105SRR55147690.1410079560ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/009/SRR5514769/SRR5514769.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/009/SRR5514769
71SRP106579SAMN06909042SRR55147702.1777038000ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/000/SRR5514770/SRR5514770.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/000/SRR5514770
72SRP106579SAMN06909043SRR55147711.4009360080ftp.sra.ebi.ac.uk/vol1/fastq/SRR551/001/SRR5514771/SRR5514771.fastq.gzftp.sra.ebi.ac.uk/vol1/srr/SRR551/001/SRR5514771



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