MDA

Project list (click to check detailed information)

IDProject AccessionOrganismStudy TitleCenter NameCancer TypeAmplification Method
1SRP014781Homo sapiensSingle Neuron Sequencing Quantifies L1 Retrotransposition and Somatic Mutation in the Human BrainBoston Children's Hospitalnotcancer-neuronMDA
2SRP052627Homo sapiensWhole-genome sequencing of glioblastoma nucleiDana-Farber Cancer InstituteGlioblastomaMDA
3SRP052954Homo sapiensWhole-genome sequencing of RPE-1 cells with induced micronucleiDana-Farber Cancer Institutenotcancer-retinal pigment epithelial cellsMDA
4SRP017516Homo sapiensHomo sapiens strain:HuRef Genome sequencingJCVInotcancer-germ-spermMDA
5SRP013494Homo sapiensSingle sperm whole genome sequencingStanford Universitynotcancer-germ-spermMDA
6SRP030642Homo sapiensSingle Neuron and Fibroblast SequencingUniversity of Virginianotcancer-neuron and fibroblastDOP-PCR,MDA
7SRP052908Homo sapienseWGA-Seq for single cell whole genome sequencingPeking UniversityColorectal cancer and HUVECeMDA,MDA,MALBAC,DOP-PCR
8SRP051114Homo sapiensHomo sapiens Genome sequencingBoston Childrens Hospitalnotcancer-neuron and lymphoblastDOP-PCR,MDA
9SRP041470Homo sapiensSingle-neuron whole-genome analysis of spatial patterns of somatic mutation in the human brainBoston Children's Hospitalnotcancer-neuronMDA
10SRP050588Homo sapiensComparison of Whole Genome Amplification Methods used in Single-cell SequencingBGIGastric cancer and lymphoblastoidMDA,MALBAC,DOP-PCR
11SRP013572Homo sapiensHomo sapiens (taxid:9606) Genome SequencingUT MD Anderson Cancer CenterBreast cancerMDA
12SRP061939Homo sapiensHomo sapiens Genome sequencing and assemblyChildren's Hospital Boston / Harvard Medical Schoolnotcancer-neuronMDA
13SRP067062Homo sapiensSingle cell sequencing of human dermal fibroblastAlbert Einstein College of Medicinenotcancer-dermal fibroblastSCMDA,MDA
14SRP106579Homo sapiensSingle-stranded Sequencing using microfluidic reactors (SISSOR)Univ. of California San Diegonotcancer-skin fibroblastMDA
15SRP102259Homo sapiensSingle-Cell Whole Genome Analyses by Linear Amplification via Transposon Insertion (LIANTI)Harvard Universitynotcancer-fibroblastLIANTI,MDA,MALBAC,DOP-PCR
16SRP074289Homo sapiensColorectal Cancer Single Cell SequencingUT MD Anderson Cancer CenterColorectal cancerMDA
17SRP178894Homo sapiensSingle cell whole genome sequencing using primary template amplification (PTA)St. Jude Children's Research Hospitalnotcancer-lymphoblastoid and cord bloodPTA,SCMDA
18SRP058890Homo sapiensHomo sapiensUT MD Anderson Cancer CenterBreast cancerMDA
19SRP219003Homo sapiensLandscape of Somatic Mutations in B Lymphocytes Across Human LifespanAlbert Einstein College of Medicinenotcancer-B lymphocytesMDA
20SRP345275Homo sapiensMaintenance of Genome Sequence Integrity in Long -and Short-lived Rodent SpeciesALBERT EINSTEIN COLLEGE OF MEDICINE, INCnotcancer-primary lung fibroblastsSCMDA
21SRP366675Homo sapiensSingle-cell analysis of Somatic Mutations in Human Bronchial Epithelial Cells in Relation to Aging and SmokingALBERT EINSTEIN COLLEGE OF MEDICINE, INCnotcancer-lungMDA
22SRP091915Homo sapiensGenome-wide chromosome conformation during early human cortical developmentUNIVERSITY OF CALIFORNIA LOS ANGELESnotcancer-liverMDA
23SRP320769Homo sapiensSingle-cell analysis of somatic mutation burden in mammary cells of pathoALBERT EINSTEIN COLLEGE OF MEDICINE, INCnotcancer-mammary epithelial SCMDA
24ERP024468Homo sapiensComparison of seven single cell Whole Genome Amplification commercial kits using targeted sequencingEuropean Bioinformatics Institute;Department of Computer Science and Applied Mathematics;Weizmann Institute of Sciencenotcancer-embryonic stem and epithelial LA-PCR,MALBAC,DOP-PCR,MDA
25ERP137498Homo sapiensWhole Genome Amplification surveying yield, reproducibility and heterozygous balance, reported by MIPs targeting STRsEuropean Bioinformatics Institute;WISnotcancer-embryonic stem MALBAC,DOP-PCR,MDA
26SRP188831Homo sapiensHigh-throughput single-cell whole-genome amplification through centrifugal emulsification and eMDAPeking UniversityCervical cancerMiCA-eMDA
27SRP341378Homo sapiensSingle-cell sequencing of human cell linesCornell Universitynotcancer-lymphoblastoid and embryonic stem and Tumor-derivedMDA,DLP+

Statistics



For questions and suggestions, please contact: heshiyang@seu.edu.cn © HSCGD. State Key Laboratory of Digital Medical Engineering, Southeast University

苏ICP备2024124065号